Transcriptome patterns in hidradenitis suppurativa: support for the role of antimicrobial peptides and interferon pathways in disease pathogenesis.

Clinical and experimental dermatology 2019 Vol.44(8) p. 882-892

Shanmugam VK, Jones D, McNish S, Bendall ML, Crandall KA

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Abstract

[BACKGROUND] Hidradenitis suppurativa (HS) is a recurrent inflammatory disease of the apocrine sweat glands. Immune dysregulation probably contributes to the pathogenesis of HS.

[AIM] To harness mRNA expression arrays to investigate the transcriptome profile in HS compared with control skin.

[METHODS] Illumina HumanHT-12 v4 Expression BeadChips were used to measure mRNA expression in skin samples from HS (n = 10) and abdominoplasty (n = 11) skin specimens. Differentially expressed genes were detected by fitting genewise linear models to the normalized expression data and then modelling using the web-based software Ingenuity Pathway Analysis.

[RESULTS] The antimicrobial peptide Dermcidin and the cytokine regulator interleukin (IL)-37 were both significantly downregulated in the HS specimens (Dermcidin expression log ratio -3.93, expression P = 0.04; IL-37 expression log ratio -3.29, expression P < 0.001). Pathway analysis revealed the interferon-signalling pathway, leucocyte extravasation pathway, T helper 1 and 2 pathways and nuclear factor of activated T cells as the top-five upregulated pathways in the HS samples.

[CONCLUSION] Evaluation of transcriptome patterns in HS compared with normal skin demonstrated downregulation of the antimicrobial peptide Dermcidin and the innate immune regulator IL-37, as well as upregulation of interferon pathways and pathways of leucocyte activation.

추출된 의학 개체 (NER)

유형영어 표현한국어 / 풀이UMLS CUI출처등장
시술 abdominoplasty 복부성형술 dict 1
해부 skin scispacy 1
해부 leucocyte scispacy 1
해부 nuclear scispacy 1
해부 T cells scispacy 1
합병증 hidradenitis suppurativa scispacy 1
약물 [BACKGROUND] Hidradenitis suppurativa scispacy 1
약물 interferon scispacy 1
질환 hidradenitis suppurativa C0162836
Hidradenitis Suppurativa
scispacy 1
질환 disease scispacy 1
질환 samples scispacy 1
기타 interferon scispacy 1
기타 apocrine sweat glands scispacy 1
기타 interleukin scispacy 1
기타 IL-37 scispacy 1
기타 interferon-signalling scispacy 1
기타 T helper 1 scispacy 1

MeSH Terms

Adult; Case-Control Studies; Female; Hidradenitis Suppurativa; Humans; Interferons; Interleukin-1; Leukocytes; Linear Models; Male; Metabolic Networks and Pathways; Oligonucleotide Array Sequence Analysis; Peptides; RNA, Messenger; Reference Values; Signal Transduction; Skin; Transcriptome

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